STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_17728Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
OBRU01_04255
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.897
OBRU01_08229
Fanconi anemia complementation group M.
    
 0.858
OBRU01_02238
Small nuclear ribonucleoprotein Sm D2.
    
 0.813
OBRU01_18562
DNA polymerase.
   
 0.800
OBRU01_05564
DNA polymerase delta small subunit.
    
 0.782
OBRU01_05563
DNA polymerase delta small subunit.
    
 0.782
OBRU01_18321
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.778
OBRU01_13915
DEAD box ATP-dependent RNA helicase.
   
 0.746
OBRU01_12792
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.743
OBRU01_11387
U7 snRNA-associated Sm-like protein LSm10.
    
 0.743
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.