STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_17253GPI inositol-deacylase. (893 aa)    
Predicted Functional Partners:
OBRU01_02808
Integral membrane protein, Tmp21-I.
    
 
 0.985
OBRU01_19104
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.915
OBRU01_09714
GPI transamidase component PIG-T.
    
 0.911
OBRU01_16002
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1.
    
 0.910
OBRU01_01380
Phosphatidylinositol glycan anchor biosynthesis class U protein.
    
 0.906
OBRU01_27327
Glycosylphosphatidylinositol anchor attachment 1 protein.
    
 0.889
OBRU01_21772
Glycosylphosphatidylinositol anchor attachment 1 protein.
    
 0.889
OBRU01_12542
Uncharacterized protein.
     
 0.780
OBRU01_17498
Calnexin.
    
 
 0.701
OBRU01_18228
Putative GPI ethanolamine phosphate transferase 2-like isoform 5.
   
 
 0.666
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.