STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_17045Putative sugar transporter. (314 aa)    
Predicted Functional Partners:
OBRU01_22711
Beta adaptin.
    
  0.574
OBRU01_09654
AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles.
    
  0.526
OBRU01_01359
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
    
 0.486
OBRU01_18252
Uncharacterized protein.
    
  0.464
OBRU01_05340
Ubiquilin 1,2.
    
  0.464
OBRU01_03447
Putative 39S ribosomal protein L15, mitochondrial.
   
   0.434
OBRU01_01250
28S ribosomal protein S2, mitochondrial.
    
   0.431
OBRU01_24193
Mitochondrial ribosomal protein S5 isoform 2.
    
   0.428
OBRU01_22418
Ribosomal protein L4.
    
   0.428
OBRU01_22195
Ribosomal protein L27.
    
   0.428
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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