STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_16331Protein TSSC1. (124 aa)    
Predicted Functional Partners:
OBRU01_04031
Protein fat-free-like protein.
   
 
 0.967
OBRU01_07977
Uncharacterized protein.
    
 
 0.965
OBRU01_04089
Putative late golgi protein sorting complex subunit vps53.
    
 
 0.962
OBRU01_13475
Vacuolar protein sorting.
    
 
 0.956
OBRU01_05532
Putative Vacuolar protein sorting protein.
    
 
 0.845
OBRU01_09548
THO complex subunit 6-like protein.
    
 
 0.602
OBRU01_21001
Brix domain-containing protein 2-like protein.
      
 0.514
OBRU01_24426
Cullin-4B; Belongs to the cullin family.
    
 
 0.507
OBRU01_16382
Syntaxin-like protein.
      
 0.506
OBRU01_24978
ANK_REP_REGION domain-containing protein.
      
 0.495
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.