STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_15257NAD-dependent epimerase/dehydratase. (361 aa)    
Predicted Functional Partners:
OBRU01_19466
Ribosomal protein S30.
   
  0.988
OBRU01_21846
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.917
OBRU01_05088
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.909
OBRU01_11436
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.907
OBRU01_21883
Bifunctional aminoacyl-tRNA synthetase.
  
  0.906
OBRU01_21884
Bifunctional aminoacyl-tRNA synthetase.
  
  0.906
OBRU01_21885
Putative aminoacyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  0.906
OBRU01_21556
Putative aminoacyl-tRNA synthetase.
  
  0.906
OBRU01_24963
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.904
OBRU01_12392
40S ribosomal protein S4.
   
  0.900
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
Server load: low (24%) [HD]