OBRU01_15558 protein (Operophtera brumata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OBRU01_15558

Echinoderm microtubule-associated protein-like protein. (450 aa)

Predicted Functional Partners:

OBRU01_21849

0.974

OBRU01_11233

0.956

OBRU01_05593

0.956

OBRU01_18660

0.941

OBRU01_19836

0.941

OBRU01_20335

0.941

OBRU01_17761

0.941

OBRU01_12779

0.941

OBRU01_08711

0.941

OBRU01_02364

0.941

Your Current Organism:

Operophtera brumata

NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OBRU01_02364	OBRU01_05593	A0A0L7LSM6	A0A0L7LIT6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Muscle M-line assembly protein unc-89.	0.465
OBRU01_02364	OBRU01_11233	A0A0L7LSM6	A0A0L7L0N4	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Muscle M-line assembly protein unc-89.	0.465
OBRU01_02364	OBRU01_15558	A0A0L7LSM6	A0A0L7L5E0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Echinoderm microtubule-associated protein-like protein.	0.941
OBRU01_02364	OBRU01_21849	A0A0L7LSM6	A0A0L7KSN3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Putative tubulin beta-1 chain.	0.921
OBRU01_05593	OBRU01_02364	A0A0L7LIT6	A0A0L7LSM6	Muscle M-line assembly protein unc-89.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.465
OBRU01_05593	OBRU01_08711	A0A0L7LIT6	A0A0L7LGW1	Muscle M-line assembly protein unc-89.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.465
OBRU01_05593	OBRU01_11233	A0A0L7LIT6	A0A0L7L0N4	Muscle M-line assembly protein unc-89.	Muscle M-line assembly protein unc-89.	0.436
OBRU01_05593	OBRU01_12779	A0A0L7LIT6	A0A0L7L8Z0	Muscle M-line assembly protein unc-89.	Tubulin alpha-1B chain.	0.465
OBRU01_05593	OBRU01_15558	A0A0L7LIT6	A0A0L7L5E0	Muscle M-line assembly protein unc-89.	Echinoderm microtubule-associated protein-like protein.	0.956
OBRU01_05593	OBRU01_17761	A0A0L7LIT6	A0A0L7KZZ9	Muscle M-line assembly protein unc-89.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.465
OBRU01_05593	OBRU01_18660	A0A0L7LIT6	A0A0L7KPH6	Muscle M-line assembly protein unc-89.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.465
OBRU01_05593	OBRU01_19836	A0A0L7LIT6	A0A0L7KSX6	Muscle M-line assembly protein unc-89.	Uncharacterized protein.	0.465
OBRU01_05593	OBRU01_20335	A0A0L7LIT6	A0A0L7KUZ4	Muscle M-line assembly protein unc-89.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.465
OBRU01_05593	OBRU01_21849	A0A0L7LIT6	A0A0L7KSN3	Muscle M-line assembly protein unc-89.	Putative tubulin beta-1 chain.	0.959
OBRU01_08711	OBRU01_05593	A0A0L7LGW1	A0A0L7LIT6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Muscle M-line assembly protein unc-89.	0.465
OBRU01_08711	OBRU01_11233	A0A0L7LGW1	A0A0L7L0N4	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Muscle M-line assembly protein unc-89.	0.465
OBRU01_08711	OBRU01_15558	A0A0L7LGW1	A0A0L7L5E0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Echinoderm microtubule-associated protein-like protein.	0.941
OBRU01_08711	OBRU01_21849	A0A0L7LGW1	A0A0L7KSN3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Putative tubulin beta-1 chain.	0.920
OBRU01_11233	OBRU01_02364	A0A0L7L0N4	A0A0L7LSM6	Muscle M-line assembly protein unc-89.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.465
OBRU01_11233	OBRU01_05593	A0A0L7L0N4	A0A0L7LIT6	Muscle M-line assembly protein unc-89.	Muscle M-line assembly protein unc-89.	0.436