STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_13380Organic cation transporter. (521 aa)    
Predicted Functional Partners:
OBRU01_10532
Uncharacterized protein.
   
 
 0.821
OBRU01_11771
Cleavage and polyadenylation specificity factor.
    
 0.697
OBRU01_22572
Integrator complex subunit 3.
    
 0.694
OBRU01_03682
Integrator complex subunit 10.
    
 0.680
OBRU01_05907
Putative integrator complex subunit 6.
    
 0.672
OBRU01_20962
Integrator complex subunit 1.
    
 0.671
OBRU01_20961
Integrator complex subunit 1.
    
 0.671
OBRU01_19526
Solute carrier family 35 member C2.
    
  0.669
OBRU01_04937
Uncharacterized protein.
    
 0.668
OBRU01_00243
Cell cycle regulator Mat89Bb-like protein.
    
 0.668
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.