STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_14753MADF domain-containing protein. (329 aa)    
Predicted Functional Partners:
OBRU01_00543
PUA domain-containing protein.
   
 
 0.959
OBRU01_20160
Nucleolar protein family A member 2.
   
 
 0.957
OBRU01_03081
Putative tRNA pseudouridine synthase 2.
   
 
 0.850
OBRU01_24135
Protein SHQ1-like protein.
   
 
 0.702
OBRU01_14514
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.642
OBRU01_18021
40S ribosomal protein S12.
   
 
 0.615
OBRU01_17798
Ribosomal protein L7A.
   
 
 0.615
OBRU01_20817
Uncharacterized protein.
   
    0.550
OBRU01_12504
Mediator of RNA polymerase II transcription subunit 36a.
   
 
 0.531
OBRU01_04102
Uncharacterized protein.
   
    0.475
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.