STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_14547Charged multivesicular body protein 3. (71 aa)    
Predicted Functional Partners:
OBRU01_01322
Shrub.
   
 0.998
OBRU01_18851
Charged multivesicular body protein.
   
 0.996
OBRU01_18677
Uncharacterized protein.
   
 0.993
OBRU01_09175
Charged multivesicular body protein 6-A.
    
 0.993
OBRU01_03171
Vacuolar protein sorting 4; Belongs to the AAA ATPase family.
   
 0.986
OBRU01_17810
Charged multivesicular body protein 2b.
   
 0.970
OBRU01_21856
Amsh.
    
 
 0.968
OBRU01_08799
IST1-like protein.
    
 0.968
OBRU01_27120
Putative charged multivesicular body protein.
   
 0.945
OBRU01_15363
ELL complex EAP30 subunit isoform 1.
    
 0.923
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.