STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_10840Ubiquitin carboxyl-terminal hydrolase. (811 aa)    
Predicted Functional Partners:
OBRU01_16685
Ubiquitin/40S ribosomal protein S27a fusion protein.
   
 0.981
OBRU01_16684
Ubiquitin-53aa extension protein.
    
 0.978
OBRU01_24065
Putative GMP synthase.
   
 
 0.963
OBRU01_25339
Death domain-associated protein 6.
    
 0.946
OBRU01_25531
MDM2-like protein.
    
 0.945
OBRU01_16686
Ubiquitin.
   
 0.921
OBRU01_14584
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
 0.920
OBRU01_14933
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
 0.920
OBRU01_04857
Putative NP95.
    
 
 0.912
OBRU01_04535
Gamma-glutamyl cyclotransferase-like venom protein isoform 1.
   
 0.882
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.