Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_03717 | OBRU01_08361 | A0A0L7LQU2 | A0A0L7L1Q9 | Ubiquitin thioesterase otubain-like protein. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.950 |
OBRU01_03717 | OBRU01_11009 | A0A0L7LQU2 | A0A0L7LCU6 | Ubiquitin thioesterase otubain-like protein. | Ubiquitin-conjugating enzyme E2 variant 2. | 0.783 |
OBRU01_03717 | OBRU01_15028 | A0A0L7LQU2 | A0A0L7L6S3 | Ubiquitin thioesterase otubain-like protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.890 |
OBRU01_03717 | OBRU01_15042 | A0A0L7LQU2 | A0A0L7L2A3 | Ubiquitin thioesterase otubain-like protein. | AN1-type zinc finger and ubiquitin domain-containing protein 1. | 0.917 |
OBRU01_03717 | OBRU01_15043 | A0A0L7LQU2 | A0A0L7L1T0 | Ubiquitin thioesterase otubain-like protein. | AN1-type domain-containing protein. | 0.917 |
OBRU01_03717 | OBRU01_16684 | A0A0L7LQU2 | A0A0L7L2C8 | Ubiquitin thioesterase otubain-like protein. | Ubiquitin-53aa extension protein. | 0.972 |
OBRU01_03717 | OBRU01_23326 | A0A0L7LQU2 | A0A0L7KP03 | Ubiquitin thioesterase otubain-like protein. | Ubiquitin protein ligase E3a. | 0.533 |
OBRU01_04255 | OBRU01_08229 | A0A0L7LMZ9 | A0A0L7LFC7 | Leucine-rich repeat serine/threonine-protein kinase 1. | Fanconi anemia complementation group M. | 0.774 |
OBRU01_04255 | OBRU01_08361 | A0A0L7LMZ9 | A0A0L7L1Q9 | Leucine-rich repeat serine/threonine-protein kinase 1. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.967 |
OBRU01_04255 | OBRU01_09110 | A0A0L7LMZ9 | A0A0L7LH26 | Leucine-rich repeat serine/threonine-protein kinase 1. | Putative BRCA1-associated RING domain protein. | 0.986 |
OBRU01_04255 | OBRU01_11009 | A0A0L7LMZ9 | A0A0L7LCU6 | Leucine-rich repeat serine/threonine-protein kinase 1. | Ubiquitin-conjugating enzyme E2 variant 2. | 0.774 |
OBRU01_04255 | OBRU01_15028 | A0A0L7LMZ9 | A0A0L7L6S3 | Leucine-rich repeat serine/threonine-protein kinase 1. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.882 |
OBRU01_04255 | OBRU01_15042 | A0A0L7LMZ9 | A0A0L7L2A3 | Leucine-rich repeat serine/threonine-protein kinase 1. | AN1-type zinc finger and ubiquitin domain-containing protein 1. | 0.992 |
OBRU01_04255 | OBRU01_15043 | A0A0L7LMZ9 | A0A0L7L1T0 | Leucine-rich repeat serine/threonine-protein kinase 1. | AN1-type domain-containing protein. | 0.992 |
OBRU01_04255 | OBRU01_16684 | A0A0L7LMZ9 | A0A0L7L2C8 | Leucine-rich repeat serine/threonine-protein kinase 1. | Ubiquitin-53aa extension protein. | 0.967 |
OBRU01_04255 | OBRU01_23326 | A0A0L7LMZ9 | A0A0L7KP03 | Leucine-rich repeat serine/threonine-protein kinase 1. | Ubiquitin protein ligase E3a. | 0.566 |
OBRU01_08229 | OBRU01_04255 | A0A0L7LFC7 | A0A0L7LMZ9 | Fanconi anemia complementation group M. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.774 |
OBRU01_08229 | OBRU01_08361 | A0A0L7LFC7 | A0A0L7L1Q9 | Fanconi anemia complementation group M. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.979 |
OBRU01_08229 | OBRU01_09110 | A0A0L7LFC7 | A0A0L7LH26 | Fanconi anemia complementation group M. | Putative BRCA1-associated RING domain protein. | 0.922 |
OBRU01_08229 | OBRU01_11009 | A0A0L7LFC7 | A0A0L7LCU6 | Fanconi anemia complementation group M. | Ubiquitin-conjugating enzyme E2 variant 2. | 0.960 |
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