OBRU01_13621 protein (Operophtera brumata) - STRING interaction network

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OBRU01_13621

DNA-directed RNA polymerase II subunit RPB7-like protein. (199 aa)

Predicted Functional Partners:

OBRU01_05493

0.999

OBRU01_21622

0.998

OBRU01_18765

0.998

OBRU01_15003

0.998

OBRU01_05475

0.998

OBRU01_02000

0.998

OBRU01_06010

0.998

OBRU01_05041

0.998

OBRU01_00544

0.998

OBRU01_13246

0.997

Your Current Organism:

Operophtera brumata

NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OBRU01_00544	OBRU01_02000	A0A0L7LV06	A0A0L7LDX2	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Transcription elongation factor SPT5.	0.997
OBRU01_00544	OBRU01_05041	A0A0L7LV06	A0A0L7LMP5	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
OBRU01_00544	OBRU01_05475	A0A0L7LV06	A0A0L7L595	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
OBRU01_00544	OBRU01_05493	A0A0L7LV06	A0A0L7LMT3	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase II subunit RPB11.	0.999
OBRU01_00544	OBRU01_06010	A0A0L7LV06	A0A0L7LMJ0	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase subunit 6-like protein.	0.999
OBRU01_00544	OBRU01_13246	A0A0L7LV06	A0A0L7L8R1	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.997
OBRU01_00544	OBRU01_13621	A0A0L7LV06	A0A0L7L7Q0	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase II subunit RPB7-like protein.	0.998
OBRU01_00544	OBRU01_15003	A0A0L7LV06	A0A0L7L4Y6	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase II polypeptide.	0.999
OBRU01_00544	OBRU01_18765	A0A0L7LV06	A0A0L7KYI4	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	DNA-directed RNA polymerase II.	0.999
OBRU01_00544	OBRU01_21622	A0A0L7LV06	A0A0L7KSW8	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.996
OBRU01_02000	OBRU01_00544	A0A0L7LDX2	A0A0L7LV06	Transcription elongation factor SPT5.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.997
OBRU01_02000	OBRU01_05041	A0A0L7LDX2	A0A0L7LMP5	Transcription elongation factor SPT5.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.997
OBRU01_02000	OBRU01_05475	A0A0L7LDX2	A0A0L7L595	Transcription elongation factor SPT5.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
OBRU01_02000	OBRU01_05493	A0A0L7LDX2	A0A0L7LMT3	Transcription elongation factor SPT5.	DNA-directed RNA polymerase II subunit RPB11.	0.996
OBRU01_02000	OBRU01_06010	A0A0L7LDX2	A0A0L7LMJ0	Transcription elongation factor SPT5.	DNA-directed RNA polymerase subunit 6-like protein.	0.997
OBRU01_02000	OBRU01_13246	A0A0L7LDX2	A0A0L7L8R1	Transcription elongation factor SPT5.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.990
OBRU01_02000	OBRU01_13621	A0A0L7LDX2	A0A0L7L7Q0	Transcription elongation factor SPT5.	DNA-directed RNA polymerase II subunit RPB7-like protein.	0.998
OBRU01_02000	OBRU01_15003	A0A0L7LDX2	A0A0L7L4Y6	Transcription elongation factor SPT5.	DNA-directed RNA polymerase II polypeptide.	0.998
OBRU01_02000	OBRU01_18765	A0A0L7LDX2	A0A0L7KYI4	Transcription elongation factor SPT5.	DNA-directed RNA polymerase II.	0.998
OBRU01_02000	OBRU01_21622	A0A0L7LDX2	A0A0L7KSW8	Transcription elongation factor SPT5.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.998