STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_06530TTC27 protein. (147 aa)    
Predicted Functional Partners:
OBRU01_19333
No child left behind.
   
    0.878
OBRU01_12668
Putative wd-repeat protein.
   
    0.868
OBRU01_08989
Katanin p80 WD40-containing subunit B1.
   
  
 0.832
OBRU01_13080
Putative bap28.
   
    0.809
OBRU01_16521
WD repeat-containing protein 3.
   
  
 0.787
OBRU01_03201
WD repeat-containing protein 3.
   
  
 0.787
OBRU01_00981
Uncharacterized protein.
   
    0.773
OBRU01_00980
Uncharacterized protein.
   
    0.773
OBRU01_10109
Ribosome biogenesis protein tsr1 (20S rrna accumulation protein 1).
   
    0.771
OBRU01_02260
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.762
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.