STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_12698Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
OBRU01_18362
Putative NEDD8.
    
  0.620
OBRU01_05837
Uncharacterized protein.
    
 
 0.619
OBRU01_09678
Putative Cullin-associated NEDD8-dissociated protein 1.
     
 0.618
OBRU01_06552
Putative coiled-coil domain containing 22.
     
 0.591
OBRU01_02827
Nuclear excision repair protein Rad23.
    
 0.585
OBRU01_01538
E3 ubiquitin-protein ligase mind-bomb.
   
 0.559
OBRU01_01537
Putative mind bomb.
   
 0.559
OBRU01_05340
Ubiquilin 1,2.
   
 0.544
OBRU01_25462
F-box/SPRY domain-containing protein 1.
    
  0.541
OBRU01_19466
Ribosomal protein S30.
    
  0.537
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.