Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_01167 | OBRU01_02208 | A0A0L7LRZ1 | A0A0L7LSS9 | Dynein light chain roadblock. | Dynactin. | 0.854 |
OBRU01_01167 | OBRU01_05178 | A0A0L7LRZ1 | A0A0L7LNW9 | Dynein light chain roadblock. | Dynactin. | 0.792 |
OBRU01_01167 | OBRU01_05179 | A0A0L7LRZ1 | A0A0L7LN88 | Dynein light chain roadblock. | Dynactin. | 0.792 |
OBRU01_01167 | OBRU01_05923 | A0A0L7LRZ1 | A0A0L7LMB7 | Dynein light chain roadblock. | Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. | 0.465 |
OBRU01_01167 | OBRU01_07426 | A0A0L7LRZ1 | A0A0L7LKA8 | Dynein light chain roadblock. | Dipeptidase. | 0.465 |
OBRU01_01167 | OBRU01_11724 | A0A0L7LRZ1 | A0A0L7LBP0 | Dynein light chain roadblock. | Dynein heavy chain 6, axonemal. | 0.724 |
OBRU01_01167 | OBRU01_13785 | A0A0L7LRZ1 | A0A0L7L7E2 | Dynein light chain roadblock. | Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. | 0.465 |
OBRU01_01167 | OBRU01_17260 | A0A0L7LRZ1 | A0A0L7L0S4 | Dynein light chain roadblock. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.975 |
OBRU01_02208 | OBRU01_01167 | A0A0L7LSS9 | A0A0L7LRZ1 | Dynactin. | Dynein light chain roadblock. | 0.854 |
OBRU01_02208 | OBRU01_05178 | A0A0L7LSS9 | A0A0L7LNW9 | Dynactin. | Dynactin. | 0.995 |
OBRU01_02208 | OBRU01_05179 | A0A0L7LSS9 | A0A0L7LN88 | Dynactin. | Dynactin. | 0.995 |
OBRU01_02208 | OBRU01_09349 | A0A0L7LSS9 | A0A0L7LFQ0 | Dynactin. | WD_REPEATS_REGION domain-containing protein. | 0.946 |
OBRU01_02208 | OBRU01_11724 | A0A0L7LSS9 | A0A0L7LBP0 | Dynactin. | Dynein heavy chain 6, axonemal. | 0.737 |
OBRU01_02208 | OBRU01_17260 | A0A0L7LSS9 | A0A0L7L0S4 | Dynactin. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.969 |
OBRU01_02208 | OBRU01_18406 | A0A0L7LSS9 | A0A0L7KZ27 | Dynactin. | WD repeat-containing protein 67. | 0.910 |
OBRU01_05178 | OBRU01_01167 | A0A0L7LNW9 | A0A0L7LRZ1 | Dynactin. | Dynein light chain roadblock. | 0.792 |
OBRU01_05178 | OBRU01_02208 | A0A0L7LNW9 | A0A0L7LSS9 | Dynactin. | Dynactin. | 0.995 |
OBRU01_05178 | OBRU01_09349 | A0A0L7LNW9 | A0A0L7LFQ0 | Dynactin. | WD_REPEATS_REGION domain-containing protein. | 0.928 |
OBRU01_05178 | OBRU01_11724 | A0A0L7LNW9 | A0A0L7LBP0 | Dynactin. | Dynein heavy chain 6, axonemal. | 0.704 |
OBRU01_05178 | OBRU01_17260 | A0A0L7LNW9 | A0A0L7L0S4 | Dynactin. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.959 |
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