STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_11435DTW domain-containing protein. (251 aa)    
Predicted Functional Partners:
OBRU01_23797
Probable ribosome biogenesis protein OBRU01_23797; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.524
OBRU01_09085
DTW domain-containing protein.
      
 0.524
OBRU01_00021
Putative tRNA-dihydrouridine synthase.
      
 0.524
OBRU01_21001
Brix domain-containing protein 2-like protein.
   
  
 0.471
OBRU01_07284
tRNA-dihydrouridine synthase.
   
  
 0.466
OBRU01_16331
Protein TSSC1.
      
 0.453
OBRU01_09225
Putative tRNA (Guanine-N2-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.453
OBRU01_09226
tRNA (Guanine-N2-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.453
OBRU01_23039
T-diRNAhydrouridine synthase.
   
  
 0.450
OBRU01_15824
Type II inositol-1,4,5-trisphosphate 5-phosphatase.
      
 0.446
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.