STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_10325Putative Nuclear lim interactor-interacting factor. (119 aa)    
Predicted Functional Partners:
OBRU01_05122
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.954
OBRU01_14581
Uncharacterized protein.
    
 0.885
OBRU01_00795
Mitochondrial import inner membrane translocase.
   
 0.863
OBRU01_14972
Putative mitochondrial import inner membrane translocase subunit tim21.
    
 0.827
OBRU01_13246
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.822
OBRU01_10290
Lipin-3.
    
 0.817
OBRU01_10289
Lipin-3.
    
 0.817
OBRU01_05493
DNA-directed RNA polymerase II subunit RPB11.
    
 0.790
OBRU01_06010
DNA-directed RNA polymerase subunit 6-like protein.
   
 0.789
OBRU01_15003
DNA-directed RNA polymerase II polypeptide.
    
 0.787
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.