STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_06070DUF1758 domain-containing protein. (630 aa)    
Predicted Functional Partners:
OBRU01_08229
Fanconi anemia complementation group M.
    
 0.953
OBRU01_22872
Replication protein A middle subunit.
    
  0.663
OBRU01_01959
Aly protein.
    
 0.649
OBRU01_25840
Histone-binding protein RBBP7.
    
  0.646
OBRU01_11317
MPN domain-containing protein.
    
  0.550
OBRU01_24446
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
  0.527
OBRU01_08506
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
  0.527
OBRU01_12712
Replication protein A1.
    
 0.517
OBRU01_08230
Excision repair cross-complementing 1 ercc1.
    
  0.512
OBRU01_00596
Mediator of RNA polymerase II transcription subunit 23.
    
  0.511
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.