STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_10001NEFA-interacting nuclear protein NIP30. (82 aa)    
Predicted Functional Partners:
OBRU01_11661
Putative homeobox transcription factor.
    
   0.982
OBRU01_12133
Putative mrna splicing factor.
    
   0.944
OBRU01_00648
Cell division control protein.
    
   0.944
OBRU01_24393
Mitochondrial import inner membrane translocase subunit Tim22.
    
   0.826
OBRU01_19297
Pre-mRNA-processing-splicing factor 8.
    
   0.826
OBRU01_19296
RRM_4 domain-containing protein.
    
   0.826
OBRU01_11030
Pre-mRNA-processing-splicing factor 8.
    
   0.826
OBRU01_10884
Protein FAM32A.
    
 
 0.795
OBRU01_18076
Tsunagi.
   
   0.794
OBRU01_05954
PRKR-interacting protein 1-like protein.
    
 
 0.793
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.