STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_09435Serine/threonine-protein kinase RIO1. (458 aa)    
Predicted Functional Partners:
OBRU01_20817
Uncharacterized protein.
   
 0.999
OBRU01_21019
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.997
OBRU01_19466
Ribosomal protein S30.
    
  0.993
OBRU01_17146
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.991
OBRU01_05088
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.990
OBRU01_24077
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.988
OBRU01_08874
Ribosomal protein S9.
   
  0.987
OBRU01_02665
40S ribosomal protein S6.
  
  0.987
OBRU01_22544
Protein arginine N-methyltransferase.
    
 
 0.986
OBRU01_11436
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.986
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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