STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_08799IST1-like protein. (374 aa)    
Predicted Functional Partners:
OBRU01_03171
Vacuolar protein sorting 4; Belongs to the AAA ATPase family.
   
 0.997
OBRU01_01322
Shrub.
    
 0.993
OBRU01_18851
Charged multivesicular body protein.
    
 
 0.992
OBRU01_02198
Uncharacterized protein.
   
 
 0.989
OBRU01_18677
Uncharacterized protein.
    
 
 0.982
OBRU01_14547
Charged multivesicular body protein 3.
    
 0.968
OBRU01_04987
AAA domain-containing protein.
    
 0.954
OBRU01_25523
Aaa atpase; Belongs to the AAA ATPase family.
    
 0.945
OBRU01_11255
Aaa atpase.
    
 0.945
OBRU01_09175
Charged multivesicular body protein 6-A.
    
 0.936
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.