STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_03845Uncharacterized protein. (71 aa)    
Predicted Functional Partners:
OBRU01_07988
Tata-binding protein-associated phosphoprotein.
    
 
 0.938
OBRU01_11658
TATA-box-binding protein.
    
 
 0.873
OBRU01_11657
Putative Trf2 protein.
    
 
 0.873
OBRU01_07736
Putative TATA binding protein.
    
 
 0.848
OBRU01_09712
Tata-box binding protein.
    
 
 0.783
OBRU01_05323
Transcription initiation factor IIB.
    
 
 0.619
OBRU01_10784
Chromatin-remodeling complex ATPase chain Iswi.
   
 
 0.604
OBRU01_11112
Transcription initiation factor TFIID subunit 6.
    
 
 0.555
OBRU01_07937
Transcription initiation factor TFIID subunit 2.
   
  
 0.555
OBRU01_24768
ATPase family AAA domain-containing protein 2.
   
   0.550
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.