Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_00126 | OBRU01_01024 | A0A0L7LVP4 | A0A0L7LUB1 | Vasa intronic protein. | 39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. | 0.953 |
OBRU01_00126 | OBRU01_06089 | A0A0L7LVP4 | A0A0L7LJ86 | Vasa intronic protein. | Uncharacterized protein. | 0.476 |
OBRU01_00126 | OBRU01_23217 | A0A0L7LVP4 | A0A0L7K3Q1 | Vasa intronic protein. | Ribosomal protein L10. | 0.989 |
OBRU01_01024 | OBRU01_00126 | A0A0L7LUB1 | A0A0L7LVP4 | 39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. | Vasa intronic protein. | 0.953 |
OBRU01_01024 | OBRU01_06089 | A0A0L7LUB1 | A0A0L7LJ86 | 39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. | Uncharacterized protein. | 0.595 |
OBRU01_01024 | OBRU01_17135 | A0A0L7LUB1 | A0A0L7KWW9 | 39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. | Putative nuclear exosomal rna helicase mtr4 dead-box superfamily. | 0.680 |
OBRU01_01024 | OBRU01_17137 | A0A0L7LUB1 | A0A0L7KX35 | 39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. | Helicase SKI2W. | 0.680 |
OBRU01_01024 | OBRU01_24764 | A0A0L7LUB1 | A0A0L7KJU2 | 39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. | Putative maintenance of killer 16 protein. | 0.465 |
OBRU01_05428 | OBRU01_06089 | A0A0L7LMP9 | A0A0L7LJ86 | rRNA processing protein Ebp2. | Uncharacterized protein. | 0.470 |
OBRU01_05428 | OBRU01_19128 | A0A0L7LMP9 | A0A0L7KVD4 | rRNA processing protein Ebp2. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.998 |
OBRU01_05428 | OBRU01_21001 | A0A0L7LMP9 | A0A0L7KU54 | rRNA processing protein Ebp2. | Brix domain-containing protein 2-like protein. | 0.999 |
OBRU01_05428 | OBRU01_24764 | A0A0L7LMP9 | A0A0L7KJU2 | rRNA processing protein Ebp2. | Putative maintenance of killer 16 protein. | 0.998 |
OBRU01_06089 | OBRU01_00126 | A0A0L7LJ86 | A0A0L7LVP4 | Uncharacterized protein. | Vasa intronic protein. | 0.476 |
OBRU01_06089 | OBRU01_01024 | A0A0L7LJ86 | A0A0L7LUB1 | Uncharacterized protein. | 39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. | 0.595 |
OBRU01_06089 | OBRU01_05428 | A0A0L7LJ86 | A0A0L7LMP9 | Uncharacterized protein. | rRNA processing protein Ebp2. | 0.470 |
OBRU01_06089 | OBRU01_09602 | A0A0L7LJ86 | A0A0L7LFI4 | Uncharacterized protein. | Trf4-1. | 0.655 |
OBRU01_06089 | OBRU01_17135 | A0A0L7LJ86 | A0A0L7KWW9 | Uncharacterized protein. | Putative nuclear exosomal rna helicase mtr4 dead-box superfamily. | 0.472 |
OBRU01_06089 | OBRU01_17137 | A0A0L7LJ86 | A0A0L7KX35 | Uncharacterized protein. | Helicase SKI2W. | 0.472 |
OBRU01_06089 | OBRU01_19128 | A0A0L7LJ86 | A0A0L7KVD4 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.475 |
OBRU01_06089 | OBRU01_21001 | A0A0L7LJ86 | A0A0L7KU54 | Uncharacterized protein. | Brix domain-containing protein 2-like protein. | 0.471 |
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