STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_07400Lim1. (105 aa)    
Predicted Functional Partners:
OBRU01_23930
Cyclin K; Belongs to the cyclin family.
    
   0.950
OBRU01_07399
LIM/homeobox protein Lhx1.
 
      0.762
OBRU01_10358
LIM domain-binding protein 2.
    
 0.721
OBRU01_10360
LIM domain-binding protein.
    
 0.721
OBRU01_10359
LIM domain-binding protein.
    
 0.691
OBRU01_07589
Protein daughterless.
    
  0.681
OBRU01_02369
Lim1.
 
      0.603
OBRU01_27336
GATA-binding factor A.
    
 0.592
OBRU01_18639
GATA zinc finger.
    
 0.592
OBRU01_00022
Protein big brother.
    
  0.555
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.