Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_01577 | OBRU01_04349 | A0A0L7LTS4 | A0A0L7LCS8 | Ubiquitin-activating enzyme E1c. | Ubiquitin-fold modifier-conjugating enzyme 1. | 0.729 |
OBRU01_01577 | OBRU01_05459 | A0A0L7LTS4 | A0A0L7LML8 | Ubiquitin-activating enzyme E1c. | E3 UFM1-protein ligase 1. | 0.760 |
OBRU01_01577 | OBRU01_12297 | A0A0L7LTS4 | A0A0L7LB03 | Ubiquitin-activating enzyme E1c. | ThiF domain-containing protein. | 0.836 |
OBRU01_01577 | OBRU01_19035 | A0A0L7LTS4 | A0A0L7KSB3 | Ubiquitin-activating enzyme E1c. | Ubiquitin-like modifier-activating enzyme 5. | 0.881 |
OBRU01_01577 | OBRU01_21109 | A0A0L7LTS4 | A0A0L7KU08 | Ubiquitin-activating enzyme E1c. | NEDD8-activating enzyme E1 regulatory subunit. | 0.999 |
OBRU01_01577 | OBRU01_24544 | A0A0L7LTS4 | A0A0L7KLU6 | Ubiquitin-activating enzyme E1c. | Ubiquitin-activating enzyme E1. | 0.400 |
OBRU01_01577 | OBRU01_24657 | A0A0L7LTS4 | A0A0L7KLN3 | Ubiquitin-activating enzyme E1c. | ATG7_N domain-containing protein. | 0.836 |
OBRU01_04349 | OBRU01_01577 | A0A0L7LCS8 | A0A0L7LTS4 | Ubiquitin-fold modifier-conjugating enzyme 1. | Ubiquitin-activating enzyme E1c. | 0.729 |
OBRU01_04349 | OBRU01_04618 | A0A0L7LCS8 | A0A0L7LLJ3 | Ubiquitin-fold modifier-conjugating enzyme 1. | CDK5 regulatory subunit-associated protein 3. | 0.573 |
OBRU01_04349 | OBRU01_05459 | A0A0L7LCS8 | A0A0L7LML8 | Ubiquitin-fold modifier-conjugating enzyme 1. | E3 UFM1-protein ligase 1. | 0.794 |
OBRU01_04349 | OBRU01_08224 | A0A0L7LCS8 | A0A0L7LID9 | Ubiquitin-fold modifier-conjugating enzyme 1. | Uncharacterized protein. | 0.822 |
OBRU01_04349 | OBRU01_12297 | A0A0L7LCS8 | A0A0L7LB03 | Ubiquitin-fold modifier-conjugating enzyme 1. | ThiF domain-containing protein. | 0.647 |
OBRU01_04349 | OBRU01_19035 | A0A0L7LCS8 | A0A0L7KSB3 | Ubiquitin-fold modifier-conjugating enzyme 1. | Ubiquitin-like modifier-activating enzyme 5. | 0.989 |
OBRU01_04349 | OBRU01_20937 | A0A0L7LCS8 | A0A0L7KUG6 | Ubiquitin-fold modifier-conjugating enzyme 1. | Putative CDK5 regulatory subunit associated protein 3. | 0.573 |
OBRU01_04349 | OBRU01_21109 | A0A0L7LCS8 | A0A0L7KU08 | Ubiquitin-fold modifier-conjugating enzyme 1. | NEDD8-activating enzyme E1 regulatory subunit. | 0.647 |
OBRU01_04349 | OBRU01_24544 | A0A0L7LCS8 | A0A0L7KLU6 | Ubiquitin-fold modifier-conjugating enzyme 1. | Ubiquitin-activating enzyme E1. | 0.647 |
OBRU01_04349 | OBRU01_24657 | A0A0L7LCS8 | A0A0L7KLN3 | Ubiquitin-fold modifier-conjugating enzyme 1. | ATG7_N domain-containing protein. | 0.647 |
OBRU01_04618 | OBRU01_04349 | A0A0L7LLJ3 | A0A0L7LCS8 | CDK5 regulatory subunit-associated protein 3. | Ubiquitin-fold modifier-conjugating enzyme 1. | 0.573 |
OBRU01_04618 | OBRU01_05459 | A0A0L7LLJ3 | A0A0L7LML8 | CDK5 regulatory subunit-associated protein 3. | E3 UFM1-protein ligase 1. | 0.966 |
OBRU01_04618 | OBRU01_08224 | A0A0L7LLJ3 | A0A0L7LID9 | CDK5 regulatory subunit-associated protein 3. | Uncharacterized protein. | 0.968 |
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