STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_03805Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
OBRU01_19587
RAN binding protein.
   
 0.999
OBRU01_21775
Peptidyl-prolyl cis-trans isomerase E.
   
 0.999
OBRU01_24319
Nuclear pore protein.
   
 0.998
OBRU01_23708
Uncharacterized protein.
   
 0.998
OBRU01_19249
Nuclear pore complex p54 component scnup57.
   
 0.998
OBRU01_13625
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
    
 0.998
OBRU01_08225
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.998
OBRU01_07986
Sec13-like protein; Belongs to the WD repeat SEC13 family.
   
 0.998
OBRU01_02334
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.998
OBRU01_11006
Uncharacterized protein.
   
 0.996
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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