STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_04666Sorting nexin-16. (322 aa)    
Predicted Functional Partners:
OBRU01_17516
Sorting nexin 12-like protein.
     
 0.720
OBRU01_04964
E3 ubiquitin-protein ligase.
    
 0.658
OBRU01_16382
Syntaxin-like protein.
    
 0.652
OBRU01_25087
Synaptobrevin YKT6-like protein; Belongs to the synaptobrevin family.
     
 0.587
OBRU01_08701
Vesicle transport through interaction with t-SNAREs-like protein 1A.
     
 0.575
OBRU01_00379
RAD50-interacting protein 1.
   
 
  0.571
OBRU01_07808
E3 ubiquitin-protein ligase.
    
 0.557
OBRU01_07351
E3 ubiquitin-protein ligase.
    
 0.557
OBRU01_00123
Hect type E3 ubiquitin ligase.
    
 0.557
OBRU01_00125
Putative E3 ubiquitin-protein ligase HECW2.
    
 0.557
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.