STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_02682Trafficking protein particle complex subunit 3. (127 aa)    
Predicted Functional Partners:
OBRU01_26703
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
OBRU01_23004
Uncharacterized protein.
   
 0.999
OBRU01_15252
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
OBRU01_14297
Mbp-1 interacting protein-2a.
    
 0.998
OBRU01_13009
TRS85-like protein.
    
 0.998
OBRU01_09719
Trafficking protein particle complex subunit 10.
    
 0.998
OBRU01_09071
DNA polymerase alpha subunit B.
   
 0.998
OBRU01_12919
Rab1 protein.
   
 0.997
OBRU01_20427
Foie-gras_1 domain-containing protein.
    
 0.995
OBRU01_16714
NIK-and IKBKB-binding protein-like protein.
    
 0.992
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.