STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_01748Putative RNA (Guanine-9-)-methyltransferase domain-containing protein 1. (236 aa)    
Predicted Functional Partners:
OBRU01_20470
3-hydroxyacyl-CoA dehydrogenase.
    
 0.990
OBRU01_21943
PRORP domain-containing protein.
   
 0.972
OBRU01_16885
PRORP domain-containing protein.
   
 0.972
OBRU01_05097
3-hydroxyacyl-CoA dehydrogenase.
    
 0.900
OBRU01_21492
Putative ribosome production factor 1.
   
  
 0.892
OBRU01_09125
tRNA (guanine(46)-N(7))-methyltransferase.
   
 
 0.781
wuho
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wuho; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.746
OBRU01_13650
Uncharacterized protein.
   
 
 0.698
OBRU01_02672
tRNA pseudouridine synthase.
   
 
 0.688
OBRU01_04518
Transcription factor Sp4.
   
  
 0.646
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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