STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBRU01_01533E3 ubiquitin-protein ligase MIB1. (411 aa)    
Predicted Functional Partners:
OBRU01_01537
Putative mind bomb.
 
 0.975
OBRU01_01538
E3 ubiquitin-protein ligase mind-bomb.
 
 
 0.915
OBRU01_09110
Putative BRCA1-associated RING domain protein.
  
 
 0.800
OBRU01_01679
Intraflagellar transport protein 81-like protein.
    
 0.795
OBRU01_14772
Inhibitor of nuclear factor kappa B kinase beta subunit.
    
 0.791
OBRU01_17623
PDZ domain-containing protein.
    
 0.783
OBRU01_03606
Myosin-XVIIIa.
   
 0.780
OBRU01_22455
Myosin-XVIIIa.
    
 0.779
OBRU01_00787
Unconventional myosin-XVIIIa.
    
 0.779
OBRU01_01197
Putative rab-like protein 5-like isoform 1.
    
 0.760
Your Current Organism:
Operophtera brumata
NCBI taxonomy Id: 104452
Other names: O. brumata, winter moth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.