Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_01196 | OBRU01_04627 | A0A0L7LUD7 | A0A0L7LNK3 | Suppressor of sable. | Retinoblastoma-binding protein 6. | 0.998 |
OBRU01_01196 | OBRU01_07239 | A0A0L7LUD7 | A0A0L7LJB7 | Suppressor of sable. | Ssu72 RNA polymerase II CTD phosphatase. | 0.994 |
OBRU01_01196 | OBRU01_11349 | A0A0L7LUD7 | A0A0L7LC30 | Suppressor of sable. | Cleavage stimulation factor 64-kDa subunit. | 0.995 |
OBRU01_01196 | OBRU01_12178 | A0A0L7LUD7 | A0A0L7LBC7 | Suppressor of sable. | Putative wd-repeat protein. | 0.998 |
OBRU01_01196 | OBRU01_12876 | A0A0L7LUD7 | A0A0L7L9G2 | Suppressor of sable. | Cleavage and polyadenylation specificity factor subunit 3. | 0.998 |
OBRU01_01196 | OBRU01_18232 | A0A0L7LUD7 | A0A0L7KZL5 | Suppressor of sable. | WD40 protein. | 0.998 |
OBRU01_01196 | OBRU01_19433 | A0A0L7LUD7 | A0A0L7KWP8 | Suppressor of sable. | Cleavage and polyadenylation specific factor 5. | 0.997 |
OBRU01_01196 | OBRU01_23603 | A0A0L7LUD7 | A0A0L7KP34 | Suppressor of sable. | Poly a polymerase. | 0.997 |
OBRU01_01196 | OBRU01_24541 | A0A0L7LUD7 | A0A0L7KL79 | Suppressor of sable. | Ssu72 RNA polymerase II CTD phosphatase. | 0.994 |
OBRU01_01196 | OBRU01_26310 | A0A0L7LUD7 | A0A0L7K353 | Suppressor of sable. | Cleavage and polyadenylation specificity factor subunit 2. | 0.994 |
OBRU01_04627 | OBRU01_01196 | A0A0L7LNK3 | A0A0L7LUD7 | Retinoblastoma-binding protein 6. | Suppressor of sable. | 0.998 |
OBRU01_04627 | OBRU01_07239 | A0A0L7LNK3 | A0A0L7LJB7 | Retinoblastoma-binding protein 6. | Ssu72 RNA polymerase II CTD phosphatase. | 0.993 |
OBRU01_04627 | OBRU01_11349 | A0A0L7LNK3 | A0A0L7LC30 | Retinoblastoma-binding protein 6. | Cleavage stimulation factor 64-kDa subunit. | 0.976 |
OBRU01_04627 | OBRU01_12178 | A0A0L7LNK3 | A0A0L7LBC7 | Retinoblastoma-binding protein 6. | Putative wd-repeat protein. | 0.998 |
OBRU01_04627 | OBRU01_12876 | A0A0L7LNK3 | A0A0L7L9G2 | Retinoblastoma-binding protein 6. | Cleavage and polyadenylation specificity factor subunit 3. | 0.998 |
OBRU01_04627 | OBRU01_18232 | A0A0L7LNK3 | A0A0L7KZL5 | Retinoblastoma-binding protein 6. | WD40 protein. | 0.998 |
OBRU01_04627 | OBRU01_23603 | A0A0L7LNK3 | A0A0L7KP34 | Retinoblastoma-binding protein 6. | Poly a polymerase. | 0.991 |
OBRU01_04627 | OBRU01_24541 | A0A0L7LNK3 | A0A0L7KL79 | Retinoblastoma-binding protein 6. | Ssu72 RNA polymerase II CTD phosphatase. | 0.993 |
OBRU01_04627 | OBRU01_26310 | A0A0L7LNK3 | A0A0L7K353 | Retinoblastoma-binding protein 6. | Cleavage and polyadenylation specificity factor subunit 2. | 0.994 |
OBRU01_07239 | OBRU01_01196 | A0A0L7LJB7 | A0A0L7LUD7 | Ssu72 RNA polymerase II CTD phosphatase. | Suppressor of sable. | 0.994 |
page 1 of 5