Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_00120 | OBRU01_00188 | A0A0L7LUX4 | A0A0L7LVD4 | Ima1_N domain-containing protein. | SUN domain-containing protein. | 0.665 |
OBRU01_00120 | OBRU01_17232 | A0A0L7LUX4 | A0A0L7L1G8 | Ima1_N domain-containing protein. | Lamin C; Belongs to the intermediate filament family. | 0.610 |
OBRU01_00188 | OBRU01_00120 | A0A0L7LVD4 | A0A0L7LUX4 | SUN domain-containing protein. | Ima1_N domain-containing protein. | 0.665 |
OBRU01_00188 | OBRU01_03005 | A0A0L7LVD4 | A0A0L7LKI0 | SUN domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.801 |
OBRU01_00188 | OBRU01_05038 | A0A0L7LVD4 | A0A0L7LNB7 | SUN domain-containing protein. | Nesprin-1. | 0.888 |
OBRU01_00188 | OBRU01_05039 | A0A0L7LVD4 | A0A0L7LNR0 | SUN domain-containing protein. | Nesprin-1. | 0.888 |
OBRU01_00188 | OBRU01_07954 | A0A0L7LVD4 | A0A0L7LHH0 | SUN domain-containing protein. | Megator. | 0.738 |
OBRU01_00188 | OBRU01_08556 | A0A0L7LVD4 | A0A0L7LHJ4 | SUN domain-containing protein. | Polo-like kinase 4. | 0.735 |
OBRU01_00188 | OBRU01_16153 | A0A0L7LVD4 | A0A0L7L1E0 | SUN domain-containing protein. | Serine/threonine protein kinase. | 0.760 |
OBRU01_00188 | OBRU01_17232 | A0A0L7LVD4 | A0A0L7L1G8 | SUN domain-containing protein. | Lamin C; Belongs to the intermediate filament family. | 0.891 |
OBRU01_00188 | OBRU01_17807 | A0A0L7LVD4 | A0A0L7KYY0 | SUN domain-containing protein. | Putative growth arrest-specific 2. | 0.579 |
OBRU01_00188 | OBRU01_27171 | A0A0L7LVD4 | A0A0L7K287 | SUN domain-containing protein. | Putative kakapo. | 0.579 |
OBRU01_03005 | OBRU01_00188 | A0A0L7LKI0 | A0A0L7LVD4 | Histone H2A; Belongs to the histone H2A family. | SUN domain-containing protein. | 0.801 |
OBRU01_03005 | OBRU01_08556 | A0A0L7LKI0 | A0A0L7LHJ4 | Histone H2A; Belongs to the histone H2A family. | Polo-like kinase 4. | 0.798 |
OBRU01_03005 | OBRU01_16153 | A0A0L7LKI0 | A0A0L7L1E0 | Histone H2A; Belongs to the histone H2A family. | Serine/threonine protein kinase. | 0.831 |
OBRU01_05038 | OBRU01_00188 | A0A0L7LNB7 | A0A0L7LVD4 | Nesprin-1. | SUN domain-containing protein. | 0.888 |
OBRU01_05038 | OBRU01_17232 | A0A0L7LNB7 | A0A0L7L1G8 | Nesprin-1. | Lamin C; Belongs to the intermediate filament family. | 0.823 |
OBRU01_05039 | OBRU01_00188 | A0A0L7LNR0 | A0A0L7LVD4 | Nesprin-1. | SUN domain-containing protein. | 0.888 |
OBRU01_05039 | OBRU01_17232 | A0A0L7LNR0 | A0A0L7L1G8 | Nesprin-1. | Lamin C; Belongs to the intermediate filament family. | 0.823 |
OBRU01_07954 | OBRU01_00188 | A0A0L7LHH0 | A0A0L7LVD4 | Megator. | SUN domain-containing protein. | 0.738 |
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