Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBRU01_00166 | OBRU01_01966 | A0A0L7LWH1 | A0A0L7LRW9 | P21-activated protein kinase-interacting protein 1-like protein. | U3 small nucleolar ribonucleoprotein component. | 0.945 |
OBRU01_00166 | OBRU01_05428 | A0A0L7LWH1 | A0A0L7LMP9 | P21-activated protein kinase-interacting protein 1-like protein. | rRNA processing protein Ebp2. | 0.953 |
OBRU01_00166 | OBRU01_08604 | A0A0L7LWH1 | A0A0L7LHP5 | P21-activated protein kinase-interacting protein 1-like protein. | Putative ribosomal L1 domain containing 1. | 0.952 |
OBRU01_00166 | OBRU01_08896 | A0A0L7LWH1 | A0A0L7LH77 | P21-activated protein kinase-interacting protein 1-like protein. | Ribosomal protein L24. | 0.963 |
OBRU01_00166 | OBRU01_14917 | A0A0L7LWH1 | A0A0L7L5J2 | P21-activated protein kinase-interacting protein 1-like protein. | Ribosome production factor 2-like protein. | 0.974 |
OBRU01_00166 | OBRU01_19128 | A0A0L7LWH1 | A0A0L7KVD4 | P21-activated protein kinase-interacting protein 1-like protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.955 |
OBRU01_00166 | OBRU01_21001 | A0A0L7LWH1 | A0A0L7KU54 | P21-activated protein kinase-interacting protein 1-like protein. | Brix domain-containing protein 2-like protein. | 0.950 |
OBRU01_00166 | OBRU01_21492 | A0A0L7LWH1 | A0A0L7KSW5 | P21-activated protein kinase-interacting protein 1-like protein. | Putative ribosome production factor 1. | 0.936 |
OBRU01_00166 | OBRU01_24342 | A0A0L7LWH1 | A0A0L7KLD3 | P21-activated protein kinase-interacting protein 1-like protein. | Ribosomal protein L24. | 0.963 |
OBRU01_00166 | OBRU01_24764 | A0A0L7LWH1 | A0A0L7KJU2 | P21-activated protein kinase-interacting protein 1-like protein. | Putative maintenance of killer 16 protein. | 0.947 |
OBRU01_01966 | OBRU01_00166 | A0A0L7LRW9 | A0A0L7LWH1 | U3 small nucleolar ribonucleoprotein component. | P21-activated protein kinase-interacting protein 1-like protein. | 0.945 |
OBRU01_01966 | OBRU01_05428 | A0A0L7LRW9 | A0A0L7LMP9 | U3 small nucleolar ribonucleoprotein component. | rRNA processing protein Ebp2. | 0.955 |
OBRU01_01966 | OBRU01_08604 | A0A0L7LRW9 | A0A0L7LHP5 | U3 small nucleolar ribonucleoprotein component. | Putative ribosomal L1 domain containing 1. | 0.996 |
OBRU01_01966 | OBRU01_08896 | A0A0L7LRW9 | A0A0L7LH77 | U3 small nucleolar ribonucleoprotein component. | Ribosomal protein L24. | 0.915 |
OBRU01_01966 | OBRU01_14917 | A0A0L7LRW9 | A0A0L7L5J2 | U3 small nucleolar ribonucleoprotein component. | Ribosome production factor 2-like protein. | 0.975 |
OBRU01_01966 | OBRU01_19128 | A0A0L7LRW9 | A0A0L7KVD4 | U3 small nucleolar ribonucleoprotein component. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.983 |
OBRU01_01966 | OBRU01_21001 | A0A0L7LRW9 | A0A0L7KU54 | U3 small nucleolar ribonucleoprotein component. | Brix domain-containing protein 2-like protein. | 0.961 |
OBRU01_01966 | OBRU01_21492 | A0A0L7LRW9 | A0A0L7KSW5 | U3 small nucleolar ribonucleoprotein component. | Putative ribosome production factor 1. | 0.982 |
OBRU01_01966 | OBRU01_24342 | A0A0L7LRW9 | A0A0L7KLD3 | U3 small nucleolar ribonucleoprotein component. | Ribosomal protein L24. | 0.915 |
OBRU01_01966 | OBRU01_24764 | A0A0L7LRW9 | A0A0L7KJU2 | U3 small nucleolar ribonucleoprotein component. | Putative maintenance of killer 16 protein. | 0.918 |
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