STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF87636.1Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (542 aa)    
Predicted Functional Partners:
SFF87614.1
Urea transport system substrate-binding protein.
 
 
 0.999
SFF87657.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SFF87677.1
Urea transport system ATP-binding protein.
 
 
 0.999
SFF87697.1
Urea transport system ATP-binding protein.
 
 
 0.998
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.917
SFG84053.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.903
SFG84032.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.890
SFG69595.1
Branched-chain amino acid transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.888
SFG69624.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.873
SFG58941.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.866
Your Current Organism:
Neptunomonas qingdaonensis
NCBI taxonomy Id: 1045558
Other names: CGMCC 1.10971, KCTC 23686, N. qingdaonensis, Neptunomonas qingdaonensis Liu et al. 2013, Neptunomonas sp. P10-2-4, strain P10-2-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.