STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fur-2Fur family transcriptional regulator, zinc uptake regulator; Belongs to the Fur family. (164 aa)    
Predicted Functional Partners:
znuC
Zinc transport system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 0.980
SFF79703.1
Zinc transport system permease protein.
 
  
 0.936
SFF86659.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.898
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.871
SFF79767.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.861
SFF79678.1
Multidrug resistance protein, MATE family.
       0.798
SFG05844.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.674
SFG69321.1
Hypothetical protein.
  
    0.602
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.600
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.596
Your Current Organism:
Neptunomonas qingdaonensis
NCBI taxonomy Id: 1045558
Other names: CGMCC 1.10971, KCTC 23686, N. qingdaonensis, Neptunomonas qingdaonensis Liu et al. 2013, Neptunomonas sp. P10-2-4, strain P10-2-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.