STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG07154.1Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (714 aa)    
Predicted Functional Partners:
SFF79397.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.947
SFG07202.1
Transferase 2, rSAM/selenodomain-associated.
 
    0.937
SFG07226.1
Hypothetical protein.
 
     0.929
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.896
SFG23004.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.893
SFF86659.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.860
SFG21946.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
 0.856
SFG83604.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.853
SFG07179.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
 
     0.852
SFG46095.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 0.850
Your Current Organism:
Neptunomonas qingdaonensis
NCBI taxonomy Id: 1045558
Other names: CGMCC 1.10971, KCTC 23686, N. qingdaonensis, Neptunomonas qingdaonensis Liu et al. 2013, Neptunomonas sp. P10-2-4, strain P10-2-4
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