STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG05163.1Putative protease. (451 aa)    
Predicted Functional Partners:
SFG10790.1
Collagenase-like protease, PrtC family.
 
 
0.744
SFG55270.1
caffeoyl-CoA O-methyltransferase.
  
  
 0.605
SFG05187.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
       0.595
SFG11588.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.568
SFG05140.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.557
SFG10813.1
Predicted lipid carrier protein YhbT, contains SCP2 domain.
 
  
 0.473
Your Current Organism:
Neptunomonas qingdaonensis
NCBI taxonomy Id: 1045558
Other names: CGMCC 1.10971, KCTC 23686, N. qingdaonensis, Neptunomonas qingdaonensis Liu et al. 2013, Neptunomonas sp. P10-2-4, strain P10-2-4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.