STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG29993.1Transposase, IS5 family. (327 aa)    
Predicted Functional Partners:
SFG30016.1
Transposase, IS5 family.
 
     0.896
SFG29889.1
Superfamily II DNA or RNA helicase, SNF2 family.
       0.452
SFG29916.1
EH_Signature domain-containing protein.
       0.452
SFG29945.1
Flagellar motor protein MotB.
       0.452
SFG29969.1
Hypothetical protein.
       0.452
Your Current Organism:
Neptunomonas qingdaonensis
NCBI taxonomy Id: 1045558
Other names: CGMCC 1.10971, KCTC 23686, N. qingdaonensis, Neptunomonas qingdaonensis Liu et al. 2013, Neptunomonas sp. P10-2-4, strain P10-2-4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.