STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ01700.1Amino acid transporter. (634 aa)    
Predicted Functional Partners:
SDJ01739.1
Uncharacterized conserved protein YdhG, YjbR/CyaY-like superfamily, DUF1801 family.
       0.461
SDI09266.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family.
    
  0.459
SDI13115.1
Amylosucrase.
    
  0.459
SDI16169.1
Hypothetical protein.
    
  0.459
SDI09106.1
Alpha-glucosidase.
    
  0.459
SDI78614.1
Glycosidase.
    
  0.459
SDI79123.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
  0.459
SDJ89439.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
  0.459
glgE
Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
  0.459
SDJ92812.1
Alpha-glucosidase.
    
  0.459
Your Current Organism:
Arthrobacter cupressi
NCBI taxonomy Id: 1045773
Other names: A. cupressi, Arthrobacter cupressi Zhang et al. 2012, Arthrobacter sp. D48, CGMCC 1.10783, DSM 24664, strain D48
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.