STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ11404.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SDJ11370.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.566
SDJ11437.1
Phenazine biosynthesis protein PhzF family.
       0.556
SDJ85518.1
Hypothetical protein.
  
 
  0.477
SDI78087.1
Acyltransferase family protein.
  
     0.453
SDJ11473.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
       0.453
SDJ96925.1
Glyoxylase, beta-lactamase superfamily II.
   
 
 0.421
SDI52889.1
Protein of unknown function.
  
     0.410
SDI19950.1
Succinate dehydrogenase subunit C.
   
    0.407
SDJ03973.1
Hypothetical protein/3-hydroxypropanoate dehydrogenase.
   
    0.404
Your Current Organism:
Arthrobacter cupressi
NCBI taxonomy Id: 1045773
Other names: A. cupressi, Arthrobacter cupressi Zhang et al. 2012, Arthrobacter sp. D48, CGMCC 1.10783, DSM 24664, strain D48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.