STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ59656.1Dihydrolipoamide dehydrogenase. (489 aa)    
Predicted Functional Partners:
SDJ46498.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.999
SDI61497.1
2-oxoglutarate dehydrogenase E2 component.
 0.978
SDI44989.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.957
SDJ20208.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.957
SDJ13004.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.956
SDJ20168.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.952
SDI44957.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.951
SDJ12976.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.949
SDI64997.1
Glutamate synthase (NADH) large subunit.
    
 0.918
SDJ30059.1
Cytochrome c biogenesis protein CcdA.
  
 0.888
Your Current Organism:
Arthrobacter cupressi
NCBI taxonomy Id: 1045773
Other names: A. cupressi, Arthrobacter cupressi Zhang et al. 2012, Arthrobacter sp. D48, CGMCC 1.10783, DSM 24664, strain D48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.