STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ92088.1Cystathionine beta-synthase. (461 aa)    
Predicted Functional Partners:
SDJ92128.1
Cystathionine gamma-lyase.
 
 0.996
SDJ56810.1
Serine O-acetyltransferase.
 
 0.990
SDJ90123.1
Cystathionine gamma-synthase.
 
 0.982
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 0.980
SDK05351.1
Methionine-gamma-lyase.
 
 0.949
SDI91848.1
Cystathionine gamma-synthase/methionine-gamma-lyase.
  
 0.942
SDJ65758.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.941
SDJ18689.1
O-acetylhomoserine sulfhydrylase.
 
 
 0.929
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
 
 0.925
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 0.925
Your Current Organism:
Arthrobacter cupressi
NCBI taxonomy Id: 1045773
Other names: A. cupressi, Arthrobacter cupressi Zhang et al. 2012, Arthrobacter sp. D48, CGMCC 1.10783, DSM 24664, strain D48
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