STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC00334.1N-acetylneuraminate synthase. (351 aa)    
Predicted Functional Partners:
SDC00258.1
N-acylneuraminate cytidylyltransferase.
 
 
 0.989
SDC00367.1
Spore coat polysaccharide biosynthesis protein SpsG, predicted glycosyltransferase.
 
 
 0.932
SDC00292.1
Protein N-acetyltransferase, RimJ/RimL family.
 
     0.901
SDC00476.1
Hypothetical protein.
  
 
 0.867
SDC00399.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
 
 
 0.836
SDC00434.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.817
SDE19444.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
    0.672
SDD57091.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.515
SDD70351.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.515
SDE19205.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.515
Your Current Organism:
Nocardioides lianchengensis
NCBI taxonomy Id: 1045774
Other names: CGMCC 4.6858, DSM 24663, N. lianchengensis, Nocardioides lianchengensis Zhang et al. 2012, Nocardioides sp. D94-1, strain D94-1
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