STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB99786.1Sugar or nucleoside kinase, ribokinase family. (311 aa)    
Predicted Functional Partners:
SDC62165.1
PTS system, fructose-specific IIC component.
  
 
 0.885
SDB99758.1
L-fuculose-phosphate aldolase.
 
  
 0.819
SDB99725.1
Regulatory protein, tetR family.
       0.773
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.703
SDD92532.1
5'-nucleotidase.
    
 0.660
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.659
SDD05535.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.648
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.629
SDD50605.1
SIS domain-containing protein.
 
 
 0.599
xylB
Xylulokinase.
 
 
 0.571
Your Current Organism:
Nocardioides lianchengensis
NCBI taxonomy Id: 1045774
Other names: CGMCC 4.6858, DSM 24663, N. lianchengensis, Nocardioides lianchengensis Zhang et al. 2012, Nocardioides sp. D94-1, strain D94-1
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