STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD31991.1Alpha-1,6-mannosyltransferase/alpha-1, 6-mannosyltransferase. (483 aa)    
Predicted Functional Partners:
SDD32026.1
Alpha-1,2-mannosyltransferase.
 
   
 0.821
SDC00476.1
Hypothetical protein.
  
 
 0.760
SDD69683.1
Sporulation and spore germination.
  
     0.608
cpdA
3',5'-cyclic AMP phosphodiesterase CpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.607
SDD31955.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
       0.551
SDC42714.1
Uncharacterized membrane protein.
 
     0.539
SDD15910.1
3-ketosteroid 9alpha-monooxygenase subunit B.
  
  
  0.520
SDD69640.1
Sporulation and spore germination.
  
     0.511
SDD50260.1
Htaa protein.
  
     0.508
SDD42475.1
Hypothetical protein.
  
     0.501
Your Current Organism:
Nocardioides lianchengensis
NCBI taxonomy Id: 1045774
Other names: CGMCC 4.6858, DSM 24663, N. lianchengensis, Nocardioides lianchengensis Zhang et al. 2012, Nocardioides sp. D94-1, strain D94-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.