STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE41818.1Raffinose/stachyose/melibiose transport system substrate-binding protein. (459 aa)    
Predicted Functional Partners:
SFE41849.1
Multiple sugar transport system permease protein/raffinose/stachyose/melibiose transport system permease protein.
 
   0.731
SFE41880.1
Raffinose/stachyose/melibiose transport system permease protein.
 
   0.712
SFE45752.1
Multiple sugar transport system substrate-binding protein.
  
     0.600
SFE59384.1
Multiple sugar transport system substrate-binding protein.
  
     0.591
SFE08410.1
Raffinose/stachyose/melibiose transport system permease protein.
  
   0.584
SFE53306.1
Multiple sugar transport system substrate-binding protein.
  
     0.576
SFE18828.1
Multiple sugar transport system substrate-binding protein.
  
     0.545
SFE41912.1
alpha-L-rhamnosidase.
       0.541
SFE41942.1
Beta-1,4-mannooligosaccharide/beta-1, 4-mannosyl-N-acetylglucosamine phosphorylase.
       0.541
SFF35855.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
  0.529
Your Current Organism:
Paenibacillus catalpae
NCBI taxonomy Id: 1045775
Other names: CGMCC 1.10784, DSM 24714, P. catalpae, Paenibacillus catalpae Zhang et al. 2013, Paenibacillus sp. D75, strain D75
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.