STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSC_06070Dipeptidyl carboxypeptidase. (693 aa)    
Predicted Functional Partners:
DSC_06075
Hypothetical protein.
       0.575
DSC_05960
Metallopeptidase; COG3590 Predicted metalloendopeptidase.
  
   
 0.567
DSC_15390
COG2234 Predicted aminopeptidases.
 
   
 0.557
DSC_05955
Metallopeptidase; COG3590 Predicted metalloendopeptidase.
  
   
 0.545
DSC_03025
COG0308 Aminopeptidase N.
  
   
 0.541
DSC_15685
Amino acid/peptide transporter; COG3104 Dipeptide/tripeptide permease.
 
   
 0.540
ddpX
Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
      
 0.527
DSC_06080
Hypothetical protein.
       0.509
DSC_14660
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 
   0.500
DSC_01830
COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
 
     0.497
Your Current Organism:
Pseudoxanthomonas spadix
NCBI taxonomy Id: 1045855
Other names: P. spadix BD-a59, Pseudoxanthomonas spadix BD-a59, Pseudoxanthomonas spadix str. BD-a59, Pseudoxanthomonas spadix strain BD-a59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.