STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSC_15380Peptidase M23; COG4942 Membrane-bound metallopeptidase. (435 aa)    
Predicted Functional Partners:
DSC_00335
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.969
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.863
DSC_15375
COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
 
    0.820
DSC_09525
COG4913 Uncharacterized protein conserved in bacteria.
  
   0.796
DSC_09530
Hypothetical protein.
   
   0.793
DSC_13395
Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases.
 
   
 0.769
DSC_04960
Penicillin-binding protein 1A; COG5009 Membrane carboxypeptidase/penicillin-binding protein.
  
     0.571
DSC_06900
COG0860 N-acetylmuramoyl-L-alanine amidase.
 
   
 0.553
DSC_12130
Putative exported Zn-dependent protease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
 
 
   0.548
DSC_15390
COG2234 Predicted aminopeptidases.
       0.521
Your Current Organism:
Pseudoxanthomonas spadix
NCBI taxonomy Id: 1045855
Other names: P. spadix BD-a59, Pseudoxanthomonas spadix BD-a59, Pseudoxanthomonas spadix str. BD-a59, Pseudoxanthomonas spadix strain BD-a59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.