Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ESN64619.1Hypothetical protein; KEGG: NADH ubiquinone oxidoreductase 20 kDa subunit. (263 aa)    
Predicted Functional Partners:
hycE
Hypothetical protein; KEGG: NADH dehydrogenase (ubiquinone) 30 kDa subunit.
 
 
 0.999
hycD
Hypothetical protein; KEGG: respiratory-chain NADH dehydrogenase subunit 1.
 
 
 0.998
ESN64626.1
NADH dehydrogenase (quinone); KEGG: hydrogenase 4 subunit B.
 
 
 0.995
ESN64622.1
NADH dehydrogenase (quinone); KEGG: hydrogenase 4 subunit F.
 
 
 0.993
ESN64620.1
Hypothetical protein; KEGG: hydrogenase 4 subunit H.
 
 
 0.992
hyfE
Hypothetical protein; KEGG: hyfE, hydrogenase 4 membrane subunit.
 
  
 0.978
ESN64618.1
Hypothetical protein; KEGG: formate hydrogenlyase maturation HycH.
 
  
 0.969
ESN64617.1
Hypothetical protein; KEGG: hycI, hydrogenase 3 maturation protease.
 
  
 0.961
ESN64624.1
NADH dehydrogenase (quinone); KEGG: hydrogenase 4 subunit D.
 
  
 0.951
nuoI
NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 
 0.935
Your Current Organism:
Serratia sp. ATCC 39006
NCBI taxonomy Id: 104623
Other names: S. sp. ATCC 39006
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