STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESN64819.1Polyamine-transporting ATPase; KEGG: ABC transporter ATP-binding protein. (235 aa)    
Predicted Functional Partners:
ESN64820.1
Hypothetical protein; KEGG: permease.
 
 0.973
ESN61593.1
KEGG: hypothetical protein.
 0.934
ESN64818.1
Hypothetical protein; KEGG: RND family efflux transporter MFP subunit.
 
   0.907
ESN62165.1
KEGG: lipoprotein releasing system, transmembrane protein LolE.
  
 0.801
ESN62167.1
Hypothetical protein; KEGG: lolC, outer membrane-specific lipoprotein ABC transporter.
  
 0.801
ESN64822.1
Hypothetical protein; KEGG: histidine kinase.
 
     0.771
macB
Phosphonate-transporting ATPase; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
0.649
ESN64821.1
Response regulator receiver protein; KEGG: two component Fis family sigma54-specific transcriptional regulator.
       0.635
rpsK
Hypothetical protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
   
 0.510
ESN64553.1
Aspartate racemase; KEGG: amino acid adenylation domain-containing protein.
  
  
 0.510
Your Current Organism:
Serratia sp. ATCC 39006
NCBI taxonomy Id: 104623
Other names: S. sp. ATCC 39006
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